Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rpl39P62892 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rpl39P62892 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rpl39P62892 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.19□□□□□ -0.78
Rpl39P62892 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.19□□□□□ -0.78
Rpl39P62892 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rpl39P62892 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
Rpl39P62892 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.18□□□□□ -0.78
Rpl39P62892 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rpl39P62892 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Gm12626-201ENSMUST00000117339 1983 ntBASIC10.18□□□□□ -0.78
Rpl39P62892 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.18□□□□□ -0.78
Rpl39P62892 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.18□□□□□ -0.78
Rpl39P62892 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.18□□□□□ -0.78
Rpl39P62892 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.18□□□□□ -0.78
Rpl39P62892 Gm8749-201ENSMUST00000117737 331 ntBASIC10.18□□□□□ -0.78
Rpl39P62892 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.18□□□□□ -0.78
Rpl39P62892 Gm13464-201ENSMUST00000119418 935 ntBASIC10.18□□□□□ -0.78
Rpl39P62892 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Gm37153-201ENSMUST00000193637 231 ntBASIC10.18□□□□□ -0.78
Rpl39P62892 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC10.18□□□□□ -0.78
Rpl39P62892 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.18□□□□□ -0.78
Rpl39P62892 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC10.18□□□□□ -0.78
Rpl39P62892 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Rpl39P62892 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rpl39P62892 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Rpl39P62892 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.18□□□□□ -0.78
Rpl39P62892 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rpl39P62892 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rpl39P62892 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
Rpl39P62892 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rpl39P62892 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.17□□□□□ -0.78
Rpl39P62892 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.17□□□□□ -0.78
Rpl39P62892 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rpl39P62892 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rpl39P62892 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rpl39P62892 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.17□□□□□ -0.78
Rpl39P62892 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.17□□□□□ -0.78
Rpl39P62892 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rpl39P62892 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.17□□□□□ -0.78
Rpl39P62892 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Rpl39P62892 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.17□□□□□ -0.78
Rpl39P62892 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Rpl39P62892 Gm4535-201ENSMUST00000182274 558 ntBASIC10.17□□□□□ -0.78
Rpl39P62892 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Rpl39P62892 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rpl39P62892 Gm10355-201ENSMUST00000097146 517 ntBASIC10.17□□□□□ -0.78
Rpl39P62892 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms