Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rps28P62858 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 AC155298.2-201ENSMUST00000225485 6226 ntBASIC8.34□□□□□ -1.07
Rps28P62858 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rps28P62858 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC8.34□□□□□ -1.08
Rps28P62858 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Rps28P62858 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Gm7642-201ENSMUST00000216345 1809 ntBASIC8.33□□□□□ -1.08
Rps28P62858 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Rps28P62858 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC8.33□□□□□ -1.08
Rps28P62858 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Rps28P62858 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC8.33□□□□□ -1.08
Rps28P62858 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
Rps28P62858 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rps28P62858 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
Rps28P62858 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Gm5385-201ENSMUST00000118988 1559 ntBASIC8.32□□□□□ -1.08
Rps28P62858 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rps28P62858 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rps28P62858 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rps28P62858 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Rps28P62858 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Rps28P62858 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rps28P62858 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rps28P62858 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rps28P62858 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rps28P62858 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms