Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.16□□□□□ -0.14
Atxn1P54254 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.16□□□□□ -0.14
Atxn1P54254 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.16□□□□□ -0.14
Atxn1P54254 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.16□□□□□ -0.14
Atxn1P54254 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.16□□□□□ -0.14
Atxn1P54254 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.16□□□□□ -0.14
Atxn1P54254 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Gm19220-201ENSMUST00000222682 803 ntBASIC14.16□□□□□ -0.14
Atxn1P54254 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.16□□□□□ -0.14
Atxn1P54254 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Atxn1P54254 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.16□□□□□ -0.14
Atxn1P54254 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.16□□□□□ -0.14
Atxn1P54254 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atxn1P54254 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Atxn1P54254 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.15□□□□□ -0.14
Atxn1P54254 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Atxn1P54254 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Atxn1P54254 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Atxn1P54254 Gm12390-201ENSMUST00000117897 397 ntBASIC14.15□□□□□ -0.14
Atxn1P54254 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.15□□□□□ -0.14
Atxn1P54254 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.15□□□□□ -0.14
Atxn1P54254 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.15□□□□□ -0.14
Atxn1P54254 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.15□□□□□ -0.14
Atxn1P54254 Gm27701-201ENSMUST00000184498 110 ntBASIC14.15□□□□□ -0.14
Atxn1P54254 Gm28911-201ENSMUST00000188837 117 ntBASIC14.15□□□□□ -0.14
Atxn1P54254 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.15□□□□□ -0.14
Atxn1P54254 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.15□□□□□ -0.14
Atxn1P54254 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.15□□□□□ -0.14
Atxn1P54254 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Gm10478-201ENSMUST00000084451 396 ntBASIC14.15□□□□□ -0.14
Atxn1P54254 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Atxn1P54254 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Atxn1P54254 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atxn1P54254 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Atxn1P54254 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Atxn1P54254 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Gm15198-201ENSMUST00000117283 177 ntBASIC14.14□□□□□ -0.15
Atxn1P54254 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.14□□□□□ -0.15
Atxn1P54254 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.14□□□□□ -0.15
Atxn1P54254 Gm8062-201ENSMUST00000139696 444 ntBASIC14.14□□□□□ -0.15
Atxn1P54254 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Atxn1P54254 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.14□□□□□ -0.15
Atxn1P54254 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.14□□□□□ -0.15
Atxn1P54254 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Atxn1P54254 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.14□□□□□ -0.15
Atxn1P54254 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Atxn1P54254 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atxn1P54254 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.13□□□□□ -0.15
Atxn1P54254 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atxn1P54254 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atxn1P54254 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atxn1P54254 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms