Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fdft1P53798 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fdft1P53798 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fdft1P53798 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fdft1P53798 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fdft1P53798 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fdft1P53798 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fdft1P53798 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fdft1P53798 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fdft1P53798 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.28□□□□□ -0.12
Fdft1P53798 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fdft1P53798 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fdft1P53798 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Fdft1P53798 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fdft1P53798 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.27□□□□□ -0.12
Fdft1P53798 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Fdft1P53798 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Fdft1P53798 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fdft1P53798 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fdft1P53798 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Fdft1P53798 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fdft1P53798 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Fdft1P53798 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Fdft1P53798 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Fdft1P53798 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Fdft1P53798 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Fdft1P53798 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.27□□□□□ -0.13
Fdft1P53798 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Fdft1P53798 Gm5479-201ENSMUST00000160578 435 ntBASIC14.27□□□□□ -0.13
Fdft1P53798 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Gm8000-201ENSMUST00000188378 592 ntBASIC14.27□□□□□ -0.13
Fdft1P53798 Gm20553-201ENSMUST00000204205 844 ntBASIC14.27□□□□□ -0.13
Fdft1P53798 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.27□□□□□ -0.13
Fdft1P53798 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Fdft1P53798 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Fdft1P53798 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.27□□□□□ -0.13
Fdft1P53798 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Fdft1P53798 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fdft1P53798 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.26□□□□□ -0.13
Fdft1P53798 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Fdft1P53798 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.26□□□□□ -0.13
Fdft1P53798 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
Fdft1P53798 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.26□□□□□ -0.13
Fdft1P53798 Gm43514-201ENSMUST00000198852 424 ntBASIC14.26□□□□□ -0.13
Fdft1P53798 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.26□□□□□ -0.13
Fdft1P53798 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Fdft1P53798 Gm10175-201ENSMUST00000086013 645 ntBASIC14.26□□□□□ -0.13
Fdft1P53798 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Fdft1P53798 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Fdft1P53798 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Fdft1P53798 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Fdft1P53798 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.26□□□□□ -0.13
Fdft1P53798 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Fdft1P53798 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fdft1P53798 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Fdft1P53798 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fdft1P53798 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Fdft1P53798 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms