Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox2P48432 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.4□□□□□ -0.26
Sox2P48432 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.4□□□□□ -0.26
Sox2P48432 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.4□□□□□ -0.26
Sox2P48432 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox2P48432 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.4□□□□□ -0.26
Sox2P48432 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Gm7230-201ENSMUST00000173026 815 ntBASIC13.4□□□□□ -0.26
Sox2P48432 Gm6376-201ENSMUST00000209407 580 ntBASIC13.4□□□□□ -0.26
Sox2P48432 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.4□□□□□ -0.26
Sox2P48432 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox2P48432 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sox2P48432 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sox2P48432 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sox2P48432 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox2P48432 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox2P48432 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sox2P48432 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox2P48432 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Sox2P48432 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox2P48432 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.39□□□□□ -0.27
Sox2P48432 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sox2P48432 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox2P48432 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox2P48432 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox2P48432 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.39□□□□□ -0.27
Sox2P48432 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sox2P48432 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Sox2P48432 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sox2P48432 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sox2P48432 Gm8584-201ENSMUST00000171982 758 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms