Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.59□□□□□ -0.07
Cxcl12P40224 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Gm13342-201ENSMUST00000121055 207 ntBASIC14.59□□□□□ -0.07
Cxcl12P40224 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.59□□□□□ -0.07
Cxcl12P40224 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.59□□□□□ -0.07
Cxcl12P40224 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Cxcl12P40224 Gm45930-201ENSMUST00000221330 292 ntBASIC14.59□□□□□ -0.07
Cxcl12P40224 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.59□□□□□ -0.07
Cxcl12P40224 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.59□□□□□ -0.07
Cxcl12P40224 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cxcl12P40224 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.59□□□□□ -0.07
Cxcl12P40224 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.59□□□□□ -0.07
Cxcl12P40224 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.59□□□□□ -0.07
Cxcl12P40224 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cxcl12P40224 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cxcl12P40224 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.58□□□□□ -0.07
Cxcl12P40224 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl12P40224 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl12P40224 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cxcl12P40224 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.58□□□□□ -0.08
Cxcl12P40224 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.58□□□□□ -0.08
Cxcl12P40224 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Gm37008-201ENSMUST00000195712 319 ntBASIC14.58□□□□□ -0.08
Cxcl12P40224 Gm42627-201ENSMUST00000197347 224 ntBASIC14.58□□□□□ -0.08
Cxcl12P40224 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.58□□□□□ -0.08
Cxcl12P40224 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.58□□□□□ -0.08
Cxcl12P40224 Gm18473-201ENSMUST00000220543 868 ntBASIC14.58□□□□□ -0.08
Cxcl12P40224 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cxcl12P40224 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.58□□□□□ -0.08
Cxcl12P40224 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cxcl12P40224 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cxcl12P40224 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cxcl12P40224 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cxcl12P40224 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cxcl12P40224 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.57□□□□□ -0.08
Cxcl12P40224 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cxcl12P40224 Gm27331-201ENSMUST00000183705 60 ntBASIC14.57□□□□□ -0.08
Cxcl12P40224 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.57□□□□□ -0.08
Cxcl12P40224 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.57□□□□□ -0.08
Cxcl12P40224 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.57□□□□□ -0.08
Cxcl12P40224 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cxcl12P40224 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.57□□□□□ -0.08
Cxcl12P40224 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cxcl12P40224 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.56□□□□□ -0.08
Cxcl12P40224 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms