Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Upk2P38575 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk2P38575 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk2P38575 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.53□□□□□ -0.4
Upk2P38575 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk2P38575 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Upk2P38575 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Gm27397-201ENSMUST00000184997 107 ntBASIC12.53□□□□□ -0.4
Upk2P38575 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.53□□□□□ -0.4
Upk2P38575 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk2P38575 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Upk2P38575 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.53□□□□□ -0.4
Upk2P38575 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Upk2P38575 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Upk2P38575 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Upk2P38575 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.53□□□□□ -0.4
Upk2P38575 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Upk2P38575 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Upk2P38575 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk2P38575 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk2P38575 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Upk2P38575 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk2P38575 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Upk2P38575 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk2P38575 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk2P38575 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk2P38575 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Upk2P38575 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.52□□□□□ -0.4
Upk2P38575 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Gm13015-201ENSMUST00000118674 204 ntBASIC12.52□□□□□ -0.41
Upk2P38575 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.52□□□□□ -0.41
Upk2P38575 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Gm9824-201ENSMUST00000178707 561 ntBASIC12.52□□□□□ -0.41
Upk2P38575 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.52□□□□□ -0.41
Upk2P38575 Gm43125-201ENSMUST00000201724 730 ntBASIC12.52□□□□□ -0.41
Upk2P38575 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Upk2P38575 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.52□□□□□ -0.41
Upk2P38575 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Upk2P38575 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk2P38575 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk2P38575 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk2P38575 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Upk2P38575 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Upk2P38575 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk2P38575 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Gm15957-201ENSMUST00000118893 974 ntBASIC12.51□□□□□ -0.41
Upk2P38575 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Upk2P38575 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Upk2P38575 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.51□□□□□ -0.41
Upk2P38575 Gm2756-201ENSMUST00000195851 400 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Gm44335-201ENSMUST00000196879 141 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Gm2213-201ENSMUST00000197485 688 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Gm44297-201ENSMUST00000198304 141 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Gm44346-201ENSMUST00000198851 141 ntBASIC12.51□□□□□ -0.41
Upk2P38575 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Upk2P38575 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk2P38575 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms