Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
LdlrP35951 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.22□□□□□ -0.13
LdlrP35951 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LdlrP35951 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.22□□□□□ -0.13
LdlrP35951 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Gm17968-201ENSMUST00000194902 784 ntBASIC14.22□□□□□ -0.13
LdlrP35951 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.22□□□□□ -0.13
LdlrP35951 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LdlrP35951 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.22□□□□□ -0.13
LdlrP35951 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LdlrP35951 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LdlrP35951 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LdlrP35951 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.21□□□□□ -0.13
LdlrP35951 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.21□□□□□ -0.13
LdlrP35951 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LdlrP35951 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.21□□□□□ -0.13
LdlrP35951 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.21□□□□□ -0.13
LdlrP35951 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
LdlrP35951 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LdlrP35951 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LdlrP35951 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LdlrP35951 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.21□□□□□ -0.14
LdlrP35951 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LdlrP35951 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LdlrP35951 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LdlrP35951 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LdlrP35951 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LdlrP35951 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
LdlrP35951 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LdlrP35951 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LdlrP35951 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.2□□□□□ -0.14
LdlrP35951 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.2□□□□□ -0.14
LdlrP35951 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.2□□□□□ -0.14
LdlrP35951 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LdlrP35951 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LdlrP35951 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.2□□□□□ -0.14
LdlrP35951 AA543401-201ENSMUST00000164248 1269 ntBASIC14.2□□□□□ -0.14
LdlrP35951 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Gm27321-201ENSMUST00000185021 205 ntBASIC14.2□□□□□ -0.14
LdlrP35951 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.2□□□□□ -0.14
LdlrP35951 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LdlrP35951 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LdlrP35951 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LdlrP35951 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LdlrP35951 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms