Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm2495-201ENSMUST00000191160 466 ntBASIC16.33■□□□□ 0.2
Vcam1P29533 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.33■□□□□ 0.2
Vcam1P29533 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.33■□□□□ 0.2
Vcam1P29533 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vcam1P29533 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Vcam1P29533 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Vcam1P29533 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vcam1P29533 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vcam1P29533 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vcam1P29533 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vcam1P29533 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vcam1P29533 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vcam1P29533 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vcam1P29533 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.32■□□□□ 0.2
Vcam1P29533 Gm13829-201ENSMUST00000119600 138 ntBASIC16.32■□□□□ 0.2
Vcam1P29533 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.32■□□□□ 0.2
Vcam1P29533 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.32■□□□□ 0.2
Vcam1P29533 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.32■□□□□ 0.2
Vcam1P29533 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Vcam1P29533 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vcam1P29533 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vcam1P29533 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vcam1P29533 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.31■□□□□ 0.2
Vcam1P29533 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vcam1P29533 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.31■□□□□ 0.2
Vcam1P29533 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Vcam1P29533 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vcam1P29533 Gm11524-201ENSMUST00000119349 807 ntBASIC16.31■□□□□ 0.2
Vcam1P29533 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Mir7085-201ENSMUST00000184353 66 ntBASIC16.31■□□□□ 0.2
Vcam1P29533 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vcam1P29533 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vcam1P29533 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vcam1P29533 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.31■□□□□ 0.2
Vcam1P29533 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Vcam1P29533 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.31■□□□□ 0.2
Vcam1P29533 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.31■□□□□ 0.2
Vcam1P29533 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vcam1P29533 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vcam1P29533 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vcam1P29533 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.3■□□□□ 0.2
Vcam1P29533 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.3■□□□□ 0.2
Vcam1P29533 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vcam1P29533 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Gm26464-201ENSMUST00000157094 305 ntBASIC16.3■□□□□ 0.2
Vcam1P29533 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vcam1P29533 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vcam1P29533 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms