Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nckap1P28660 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nckap1P28660 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Nckap1P28660 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nckap1P28660 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nckap1P28660 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nckap1P28660 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nckap1P28660 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.21□□□□□ -0.14
Nckap1P28660 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.2□□□□□ -0.14
Nckap1P28660 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Gm14042-201ENSMUST00000120139 833 ntBASIC14.2□□□□□ -0.14
Nckap1P28660 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.2□□□□□ -0.14
Nckap1P28660 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nckap1P28660 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nckap1P28660 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nckap1P28660 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.19□□□□□ -0.14
Nckap1P28660 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Nckap1P28660 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nckap1P28660 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 Gm15460-201ENSMUST00000118147 391 ntBASIC14.19□□□□□ -0.14
Nckap1P28660 Gm14928-201ENSMUST00000120198 477 ntBASIC14.19□□□□□ -0.14
Nckap1P28660 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.19□□□□□ -0.14
Nckap1P28660 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.19□□□□□ -0.14
Nckap1P28660 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Gm42612-201ENSMUST00000197986 623 ntBASIC14.19□□□□□ -0.14
Nckap1P28660 Gm43170-201ENSMUST00000199827 612 ntBASIC14.19□□□□□ -0.14
Nckap1P28660 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.19□□□□□ -0.14
Nckap1P28660 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nckap1P28660 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nckap1P28660 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nckap1P28660 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nckap1P28660 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Nckap1P28660 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nckap1P28660 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nckap1P28660 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Nckap1P28660 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Nckap1P28660 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.18□□□□□ -0.14
Nckap1P28660 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.18□□□□□ -0.14
Nckap1P28660 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.18□□□□□ -0.14
Nckap1P28660 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.18□□□□□ -0.14
Nckap1P28660 Gm8515-201ENSMUST00000194852 576 ntBASIC14.18□□□□□ -0.14
Nckap1P28660 Gm7653-201ENSMUST00000214567 508 ntBASIC14.18□□□□□ -0.14
Nckap1P28660 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Nckap1P28660 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nckap1P28660 Gm9797-201ENSMUST00000052902 613 ntBASIC14.18□□□□□ -0.14
Nckap1P28660 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nckap1P28660 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nckap1P28660 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms