Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC18.38■□□□□ 0.53
Hoxc9P09633 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hoxc9P09633 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hoxc9P09633 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hoxc9P09633 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.38■□□□□ 0.53
Hoxc9P09633 Gm11814-201ENSMUST00000119515 929 ntBASIC18.38■□□□□ 0.53
Hoxc9P09633 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.38■□□□□ 0.53
Hoxc9P09633 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.38■□□□□ 0.53
Hoxc9P09633 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.38■□□□□ 0.53
Hoxc9P09633 Gm6007-201ENSMUST00000208170 823 ntBASIC18.38■□□□□ 0.53
Hoxc9P09633 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.38■□□□□ 0.53
Hoxc9P09633 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.38■□□□□ 0.53
Hoxc9P09633 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc9P09633 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.37■□□□□ 0.53
Hoxc9P09633 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hoxc9P09633 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hoxc9P09633 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.37■□□□□ 0.53
Hoxc9P09633 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Gm12957-201ENSMUST00000117835 377 ntBASIC18.37■□□□□ 0.53
Hoxc9P09633 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Gm27772-201ENSMUST00000184900 187 ntBASIC18.37■□□□□ 0.53
Hoxc9P09633 Gm5276-201ENSMUST00000196683 1047 ntBASIC18.37■□□□□ 0.53
Hoxc9P09633 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.37■□□□□ 0.53
Hoxc9P09633 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hoxc9P09633 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc9P09633 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hoxc9P09633 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc9P09633 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc9P09633 Gm12485-201ENSMUST00000119641 291 ntBASIC18.36■□□□□ 0.53
Hoxc9P09633 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hoxc9P09633 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc9P09633 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC18.36■□□□□ 0.53
Hoxc9P09633 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc9P09633 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Hoxc9P09633 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Hoxc9P09633 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc9P09633 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc9P09633 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc9P09633 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc9P09633 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc9P09633 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hoxc9P09633 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Hoxc9P09633 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 AC161252.3-201ENSMUST00000225465 1549 ntBASIC18.35■□□□□ 0.53
Hoxc9P09633 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.35■□□□□ 0.53
Hoxc9P09633 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.35■□□□□ 0.53
Hoxc9P09633 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Hoxc9P09633 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hoxc9P09633 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.35■□□□□ 0.53
Hoxc9P09633 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Hoxc9P09633 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc9P09633 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms