Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sod1P08228 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sod1P08228 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sod1P08228 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sod1P08228 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sod1P08228 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.32□□□□□ -0.28
Sod1P08228 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.32□□□□□ -0.28
Sod1P08228 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sod1P08228 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.32□□□□□ -0.28
Sod1P08228 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Gm12485-201ENSMUST00000119641 291 ntBASIC13.32□□□□□ -0.28
Sod1P08228 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Gm8652-201ENSMUST00000181363 964 ntBASIC13.32□□□□□ -0.28
Sod1P08228 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.32□□□□□ -0.28
Sod1P08228 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.32□□□□□ -0.28
Sod1P08228 Gm7561-201ENSMUST00000211203 886 ntBASIC13.32□□□□□ -0.28
Sod1P08228 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Sod1P08228 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sod1P08228 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Sod1P08228 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sod1P08228 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sod1P08228 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.31□□□□□ -0.28
Sod1P08228 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Sod1P08228 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.31□□□□□ -0.28
Sod1P08228 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.31□□□□□ -0.28
Sod1P08228 Gm6007-201ENSMUST00000208170 823 ntBASIC13.31□□□□□ -0.28
Sod1P08228 Gm6983-201ENSMUST00000214912 628 ntBASIC13.31□□□□□ -0.28
Sod1P08228 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.31□□□□□ -0.28
Sod1P08228 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sod1P08228 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.31□□□□□ -0.28
Sod1P08228 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.31□□□□□ -0.28
Sod1P08228 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sod1P08228 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.3□□□□□ -0.28
Sod1P08228 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sod1P08228 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.3□□□□□ -0.28
Sod1P08228 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sod1P08228 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.3□□□□□ -0.28
Sod1P08228 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sod1P08228 Gm12742-201ENSMUST00000117326 410 ntBASIC13.3□□□□□ -0.28
Sod1P08228 Gm12957-201ENSMUST00000117835 377 ntBASIC13.3□□□□□ -0.28
Sod1P08228 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms