Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.24■□□□□ 0.35
Col4a1P02463 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Mir1247-201ENSMUST00000116706 82 ntBASIC17.24■□□□□ 0.35
Col4a1P02463 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Col4a1P02463 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.24■□□□□ 0.35
Col4a1P02463 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.24■□□□□ 0.35
Col4a1P02463 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.24■□□□□ 0.35
Col4a1P02463 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col4a1P02463 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a1P02463 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col4a1P02463 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.23■□□□□ 0.35
Col4a1P02463 Gm38223-201ENSMUST00000194484 695 ntBASIC17.23■□□□□ 0.35
Col4a1P02463 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.23■□□□□ 0.35
Col4a1P02463 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Col4a1P02463 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.23■□□□□ 0.35
Col4a1P02463 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.23■□□□□ 0.35
Col4a1P02463 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Gm27572-201ENSMUST00000183702 255 ntBASIC17.23■□□□□ 0.35
Col4a1P02463 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.23■□□□□ 0.35
Col4a1P02463 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Col4a1P02463 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col4a1P02463 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.22■□□□□ 0.35
Col4a1P02463 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.22■□□□□ 0.35
Col4a1P02463 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.22■□□□□ 0.35
Col4a1P02463 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.22■□□□□ 0.35
Col4a1P02463 Gm43118-201ENSMUST00000199149 775 ntBASIC17.22■□□□□ 0.35
Col4a1P02463 Gm38671-201ENSMUST00000200573 130 ntBASIC17.22■□□□□ 0.35
Col4a1P02463 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.22■□□□□ 0.35
Col4a1P02463 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.22■□□□□ 0.35
Col4a1P02463 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col4a1P02463 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col4a1P02463 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.22■□□□□ 0.35
Col4a1P02463 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.22■□□□□ 0.35
Col4a1P02463 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.21■□□□□ 0.35
Col4a1P02463 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Col4a1P02463 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col4a1P02463 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.21■□□□□ 0.35
Col4a1P02463 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Col4a1P02463 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col4a1P02463 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Col4a1P02463 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.21■□□□□ 0.35
Col4a1P02463 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col4a1P02463 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col4a1P02463 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col4a1P02463 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.21■□□□□ 0.35
Col4a1P02463 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col4a1P02463 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms