Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC18.19■□□□□ 0.5
Ubr1O70481 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC18.19■□□□□ 0.5
Ubr1O70481 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC18.19■□□□□ 0.5
Ubr1O70481 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 AC155237.1-201ENSMUST00000226196 1279 ntBASIC18.19■□□□□ 0.5
Ubr1O70481 AC131997.1-201ENSMUST00000228611 1229 ntBASIC18.19■□□□□ 0.5
Ubr1O70481 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Ubr1O70481 Gm5687-201ENSMUST00000118252 640 ntBASIC18.19■□□□□ 0.5
Ubr1O70481 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC18.19■□□□□ 0.5
Ubr1O70481 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ubr1O70481 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ubr1O70481 Gm24447-201ENSMUST00000083977 338 ntBASIC18.19■□□□□ 0.5
Ubr1O70481 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ubr1O70481 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Ubr1O70481 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ubr1O70481 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ubr1O70481 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ubr1O70481 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC18.18■□□□□ 0.5
Ubr1O70481 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.18■□□□□ 0.5
Ubr1O70481 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ubr1O70481 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Ubr1O70481 Mir8109-201ENSMUST00000184375 117 ntBASIC18.18■□□□□ 0.5
Ubr1O70481 Gm29705-201ENSMUST00000212598 474 ntBASIC18.18■□□□□ 0.5
Ubr1O70481 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC18.18■□□□□ 0.5
Ubr1O70481 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Gm9823-201ENSMUST00000051212 327 ntBASIC18.18■□□□□ 0.5
Ubr1O70481 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC18.18■□□□□ 0.5
Ubr1O70481 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Ubr1O70481 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ubr1O70481 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ubr1O70481 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Gm8337-201ENSMUST00000187358 1938 ntBASIC18.17■□□□□ 0.5
Ubr1O70481 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.17■□□□□ 0.5
Ubr1O70481 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.17■□□□□ 0.5
Ubr1O70481 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Gm7029-201ENSMUST00000173226 450 ntBASIC18.17■□□□□ 0.5
Ubr1O70481 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC18.17■□□□□ 0.5
Ubr1O70481 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ubr1O70481 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ubr1O70481 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.17■□□□□ 0.5
Ubr1O70481 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC18.17■□□□□ 0.5
Ubr1O70481 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.17■□□□□ 0.5
Ubr1O70481 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ubr1O70481 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ubr1O70481 Gm40466-201ENSMUST00000212174 422 ntBASIC18.17■□□□□ 0.5
Ubr1O70481 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ubr1O70481 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ubr1O70481 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubr1O70481 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ubr1O70481 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubr1O70481 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC18.16■□□□□ 0.5
Ubr1O70481 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ubr1O70481 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ubr1O70481 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms