Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pde6dO55057 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.25□□□□□ -0.61
Pde6dO55057 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Gm25745-201ENSMUST00000174945 133 ntBASIC11.25□□□□□ -0.61
Pde6dO55057 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.25□□□□□ -0.61
Pde6dO55057 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.25□□□□□ -0.61
Pde6dO55057 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pde6dO55057 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pde6dO55057 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Pde6dO55057 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pde6dO55057 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.24□□□□□ -0.61
Pde6dO55057 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pde6dO55057 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.24□□□□□ -0.61
Pde6dO55057 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.24□□□□□ -0.61
Pde6dO55057 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.24□□□□□ -0.61
Pde6dO55057 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.24□□□□□ -0.61
Pde6dO55057 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.24□□□□□ -0.61
Pde6dO55057 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.24□□□□□ -0.61
Pde6dO55057 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.24□□□□□ -0.61
Pde6dO55057 Mir3081-201ENSMUST00000175305 84 ntBASIC11.24□□□□□ -0.61
Pde6dO55057 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pde6dO55057 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pde6dO55057 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pde6dO55057 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.24□□□□□ -0.61
Pde6dO55057 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.24□□□□□ -0.61
Pde6dO55057 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pde6dO55057 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pde6dO55057 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Gm10812-201ENSMUST00000099864 546 ntBASIC11.23□□□□□ -0.61
Pde6dO55057 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pde6dO55057 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pde6dO55057 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms