Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trdmt1O55055 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.65■□□□□ 0.1
Trdmt1O55055 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.65■□□□□ 0.1
Trdmt1O55055 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Efs-202ENSMUST00000227037 2540 ntBASIC15.65■□□□□ 0.1
Trdmt1O55055 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.65■□□□□ 0.1
Trdmt1O55055 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trdmt1O55055 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.65■□□□□ 0.1
Trdmt1O55055 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trdmt1O55055 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Trdmt1O55055 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Gm15429-201ENSMUST00000151268 798 ntBASIC15.64■□□□□ 0.09
Trdmt1O55055 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.64■□□□□ 0.09
Trdmt1O55055 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.64■□□□□ 0.09
Trdmt1O55055 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.64■□□□□ 0.09
Trdmt1O55055 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trdmt1O55055 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.64■□□□□ 0.09
Trdmt1O55055 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trdmt1O55055 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trdmt1O55055 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.63■□□□□ 0.09
Trdmt1O55055 Gm15376-201ENSMUST00000122258 783 ntBASIC15.63■□□□□ 0.09
Trdmt1O55055 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.63■□□□□ 0.09
Trdmt1O55055 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.63■□□□□ 0.09
Trdmt1O55055 Gm8927-201ENSMUST00000181978 981 ntBASIC15.63■□□□□ 0.09
Trdmt1O55055 Gm3222-201ENSMUST00000071282 990 ntBASIC15.63■□□□□ 0.09
Trdmt1O55055 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trdmt1O55055 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Trdmt1O55055 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trdmt1O55055 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
Trdmt1O55055 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trdmt1O55055 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trdmt1O55055 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.62■□□□□ 0.09
Trdmt1O55055 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Gm27486-201ENSMUST00000184923 80 ntBASIC15.62■□□□□ 0.09
Trdmt1O55055 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.62■□□□□ 0.09
Trdmt1O55055 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.62■□□□□ 0.09
Trdmt1O55055 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trdmt1O55055 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms