Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Smarce1O54941 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.98■□□□□ 0.31
Smarce1O54941 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.98■□□□□ 0.31
Smarce1O54941 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Smarce1O54941 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smarce1O54941 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.98■□□□□ 0.31
Smarce1O54941 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarce1O54941 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Smarce1O54941 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
Smarce1O54941 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smarce1O54941 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Smarce1O54941 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.97■□□□□ 0.31
Smarce1O54941 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.97■□□□□ 0.31
Smarce1O54941 Gm9385-201ENSMUST00000117563 472 ntBASIC16.97■□□□□ 0.31
Smarce1O54941 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.97■□□□□ 0.31
Smarce1O54941 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smarce1O54941 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.97■□□□□ 0.31
Smarce1O54941 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.97■□□□□ 0.31
Smarce1O54941 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.97■□□□□ 0.31
Smarce1O54941 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Smarce1O54941 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarce1O54941 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarce1O54941 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smarce1O54941 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Smarce1O54941 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Smarce1O54941 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.96■□□□□ 0.31
Smarce1O54941 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.96■□□□□ 0.31
Smarce1O54941 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.96■□□□□ 0.31
Smarce1O54941 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.96■□□□□ 0.31
Smarce1O54941 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarce1O54941 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarce1O54941 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Smarce1O54941 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Smarce1O54941 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarce1O54941 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.96■□□□□ 0.3
Smarce1O54941 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Smarce1O54941 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarce1O54941 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smarce1O54941 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.95■□□□□ 0.3
Smarce1O54941 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.95■□□□□ 0.3
Smarce1O54941 Gm15483-201ENSMUST00000120338 456 ntBASIC16.95■□□□□ 0.3
Smarce1O54941 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.95■□□□□ 0.3
Smarce1O54941 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.95■□□□□ 0.3
Smarce1O54941 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarce1O54941 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Smarce1O54941 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms