Protein–RNA interactions for Protein: O35902

Dsg3, Desmoglein-3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg3O35902 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.25■□□□□ 0.03
Dsg3O35902 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Dsg3O35902 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Dsg3O35902 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Dsg3O35902 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.24■□□□□ 0.03
Dsg3O35902 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Dsg3O35902 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.24■□□□□ 0.03
Dsg3O35902 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.24■□□□□ 0.03
Dsg3O35902 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.24■□□□□ 0.03
Dsg3O35902 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Gm17150-201ENSMUST00000165577 381 ntBASIC15.24■□□□□ 0.03
Dsg3O35902 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.24■□□□□ 0.03
Dsg3O35902 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.24■□□□□ 0.03
Dsg3O35902 Gm6007-201ENSMUST00000208170 823 ntBASIC15.24■□□□□ 0.03
Dsg3O35902 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.24■□□□□ 0.03
Dsg3O35902 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.24■□□□□ 0.03
Dsg3O35902 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Dsg3O35902 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Dsg3O35902 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.24■□□□□ 0.03
Dsg3O35902 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Dsg3O35902 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.23■□□□□ 0.03
Dsg3O35902 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Dsg3O35902 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Dsg3O35902 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Gm8749-201ENSMUST00000117737 331 ntBASIC15.23■□□□□ 0.03
Dsg3O35902 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.23■□□□□ 0.03
Dsg3O35902 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.23■□□□□ 0.03
Dsg3O35902 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Dsg3O35902 Mir1938-201ENSMUST00000158746 100 ntBASIC15.23■□□□□ 0.03
Dsg3O35902 Mir6420-201ENSMUST00000185032 102 ntBASIC15.23■□□□□ 0.03
Dsg3O35902 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Gm43630-201ENSMUST00000201550 776 ntBASIC15.23■□□□□ 0.03
Dsg3O35902 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.23■□□□□ 0.03
Dsg3O35902 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.23■□□□□ 0.03
Dsg3O35902 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Dsg3O35902 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.22■□□□□ 0.03
Dsg3O35902 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.22■□□□□ 0.03
Dsg3O35902 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.22■□□□□ 0.03
Dsg3O35902 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Dsg3O35902 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.22■□□□□ 0.03
Dsg3O35902 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.22■□□□□ 0.03
Dsg3O35902 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Dsg3O35902 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.22■□□□□ 0.03
Dsg3O35902 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Dsg3O35902 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Dsg3O35902 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms