Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lsm2O35900 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lsm2O35900 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lsm2O35900 Gm45167-201ENSMUST00000208007 322 ntBASIC12.72□□□□□ -0.37
Lsm2O35900 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lsm2O35900 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.72□□□□□ -0.37
Lsm2O35900 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lsm2O35900 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.72□□□□□ -0.37
Lsm2O35900 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lsm2O35900 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Lsm2O35900 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lsm2O35900 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lsm2O35900 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lsm2O35900 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lsm2O35900 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.71□□□□□ -0.37
Lsm2O35900 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Lsm2O35900 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Gm7222-201ENSMUST00000117512 906 ntBASIC12.71□□□□□ -0.37
Lsm2O35900 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lsm2O35900 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lsm2O35900 Gm4899-201ENSMUST00000178708 719 ntBASIC12.71□□□□□ -0.37
Lsm2O35900 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.71□□□□□ -0.37
Lsm2O35900 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.71□□□□□ -0.37
Lsm2O35900 Gm45747-201ENSMUST00000212203 999 ntBASIC12.71□□□□□ -0.37
Lsm2O35900 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.71□□□□□ -0.37
Lsm2O35900 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lsm2O35900 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Lsm2O35900 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Lsm2O35900 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Lsm2O35900 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm2O35900 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm2O35900 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm2O35900 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm2O35900 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm2O35900 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm2O35900 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm2O35900 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm2O35900 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lsm2O35900 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.7□□□□□ -0.38
Lsm2O35900 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lsm2O35900 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.7□□□□□ -0.38
Lsm2O35900 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lsm2O35900 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.7□□□□□ -0.38
Lsm2O35900 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.7□□□□□ -0.38
Lsm2O35900 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.7□□□□□ -0.38
Lsm2O35900 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Lsm2O35900 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Lsm2O35900 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Lsm2O35900 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lsm2O35900 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms