Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.75□□□□□ -0.37
Alx4O35137 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.75□□□□□ -0.37
Alx4O35137 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.75□□□□□ -0.37
Alx4O35137 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.75□□□□□ -0.37
Alx4O35137 Gm10060-201ENSMUST00000212002 111 ntBASIC12.75□□□□□ -0.37
Alx4O35137 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Alx4O35137 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.75□□□□□ -0.37
Alx4O35137 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Alx4O35137 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Alx4O35137 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Alx4O35137 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Alx4O35137 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Alx4O35137 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Alx4O35137 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Alx4O35137 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Alx4O35137 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Alx4O35137 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Alx4O35137 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.74□□□□□ -0.37
Alx4O35137 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Alx4O35137 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.74□□□□□ -0.37
Alx4O35137 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Alx4O35137 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Alx4O35137 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Alx4O35137 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.73□□□□□ -0.37
Alx4O35137 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx4O35137 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.73□□□□□ -0.37
Alx4O35137 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Alx4O35137 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx4O35137 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.73□□□□□ -0.37
Alx4O35137 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.73□□□□□ -0.37
Alx4O35137 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Alx4O35137 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx4O35137 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.73□□□□□ -0.37
Alx4O35137 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Alx4O35137 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.73□□□□□ -0.37
Alx4O35137 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Alx4O35137 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Alx4O35137 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx4O35137 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.73□□□□□ -0.37
Alx4O35137 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Alx4O35137 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.73□□□□□ -0.37
Alx4O35137 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Alx4O35137 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Alx4O35137 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Alx4O35137 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.72□□□□□ -0.37
Alx4O35137 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx4O35137 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Alx4O35137 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Alx4O35137 Gm9103-201ENSMUST00000119371 405 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms