Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.85□□□□□ -0.03
Ebf3O08791 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.85□□□□□ -0.03
Ebf3O08791 Gm27631-201ENSMUST00000184163 466 ntBASIC14.85□□□□□ -0.03
Ebf3O08791 Gm2451-201ENSMUST00000199447 999 ntBASIC14.85□□□□□ -0.03
Ebf3O08791 Gm10290-201ENSMUST00000200451 999 ntBASIC14.85□□□□□ -0.03
Ebf3O08791 Gm43703-201ENSMUST00000200523 763 ntBASIC14.85□□□□□ -0.03
Ebf3O08791 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ebf3O08791 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.85□□□□□ -0.03
Ebf3O08791 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.85□□□□□ -0.03
Ebf3O08791 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.85□□□□□ -0.03
Ebf3O08791 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ebf3O08791 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.85□□□□□ -0.03
Ebf3O08791 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.85□□□□□ -0.03
Ebf3O08791 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
Ebf3O08791 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ebf3O08791 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.84□□□□□ -0.03
Ebf3O08791 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ebf3O08791 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Gm12490-201ENSMUST00000120255 560 ntBASIC14.84□□□□□ -0.03
Ebf3O08791 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.84□□□□□ -0.03
Ebf3O08791 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.84□□□□□ -0.03
Ebf3O08791 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ebf3O08791 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ebf3O08791 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ebf3O08791 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf3O08791 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf3O08791 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf3O08791 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf3O08791 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf3O08791 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.83□□□□□ -0.03
Ebf3O08791 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf3O08791 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf3O08791 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ebf3O08791 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ebf3O08791 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ebf3O08791 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.83□□□□□ -0.04
Ebf3O08791 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.83□□□□□ -0.04
Ebf3O08791 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.83□□□□□ -0.04
Ebf3O08791 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.83□□□□□ -0.04
Ebf3O08791 Gm20445-201ENSMUST00000061905 565 ntBASIC14.83□□□□□ -0.04
Ebf3O08791 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ebf3O08791 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ebf3O08791 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ebf3O08791 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.83□□□□□ -0.04
Ebf3O08791 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms