Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Gm8749-201ENSMUST00000117737 331 ntBASIC12.12□□□□□ -0.47
Gm3727J3QM54 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Gm6345-202ENSMUST00000180900 204 ntBASIC12.12□□□□□ -0.47
Gm3727J3QM54 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Gm5587-201ENSMUST00000206270 674 ntBASIC12.12□□□□□ -0.47
Gm3727J3QM54 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.12□□□□□ -0.47
Gm3727J3QM54 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3727J3QM54 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.11□□□□□ -0.47
Gm3727J3QM54 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.11□□□□□ -0.47
Gm3727J3QM54 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm3727J3QM54 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.1□□□□□ -0.47
Gm3727J3QM54 Gm25925-201ENSMUST00000158314 306 ntBASIC12.1□□□□□ -0.47
Gm3727J3QM54 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm3727J3QM54 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms