Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.22□□□□□ -0.13
Gm3139J3QK78 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.22□□□□□ -0.13
Gm3139J3QK78 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3139J3QK78 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.21□□□□□ -0.13
Gm3139J3QK78 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Gm12585-201ENSMUST00000117307 290 ntBASIC14.21□□□□□ -0.13
Gm3139J3QK78 Gm15393-201ENSMUST00000120499 219 ntBASIC14.21□□□□□ -0.13
Gm3139J3QK78 Gm12134-201ENSMUST00000122109 520 ntBASIC14.21□□□□□ -0.13
Gm3139J3QK78 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gm3139J3QK78 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.21□□□□□ -0.13
Gm3139J3QK78 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.21□□□□□ -0.13
Gm3139J3QK78 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3139J3QK78 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm3139J3QK78 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm3139J3QK78 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm3139J3QK78 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.2□□□□□ -0.14
Gm3139J3QK78 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.2□□□□□ -0.14
Gm3139J3QK78 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.2□□□□□ -0.14
Gm3139J3QK78 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm3139J3QK78 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.19□□□□□ -0.14
Gm3139J3QK78 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm3139J3QK78 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms