Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Gm27300-201ENSMUST00000184085 97 ntBASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Gm27335-201ENSMUST00000184758 97 ntBASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh1F7BJK1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Gm45747-201ENSMUST00000212203 999 ntBASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdh1F7BJK1 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh1F7BJK1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms