Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb9E9Q5G2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb9E9Q5G2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb9E9Q5G2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb9E9Q5G2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhb9E9Q5G2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb9E9Q5G2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb9E9Q5G2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb9E9Q5G2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb9E9Q5G2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb9E9Q5G2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Gm15393-201ENSMUST00000120499 219 ntBASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Gm24694-201ENSMUST00000180054 110 ntBASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Gm27437-201ENSMUST00000183429 107 ntBASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Gm27663-201ENSMUST00000184839 110 ntBASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb9E9Q5G2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Mir6977-201ENSMUST00000184960 64 ntBASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb9E9Q5G2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Gm9522-201ENSMUST00000182394 926 ntBASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Gm21470-201ENSMUST00000187680 696 ntBASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb9E9Q5G2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb9E9Q5G2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms