Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC035044E0CXF8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
BC035044E0CXF8 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.12□□□□□ -0.47
BC035044E0CXF8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BC035044E0CXF8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.11□□□□□ -0.47
BC035044E0CXF8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.11□□□□□ -0.47
BC035044E0CXF8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.11□□□□□ -0.47
BC035044E0CXF8 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.11□□□□□ -0.47
BC035044E0CXF8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BC035044E0CXF8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Gm27920-201ENSMUST00000183953 96 ntBASIC12.1□□□□□ -0.47
BC035044E0CXF8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.1□□□□□ -0.47
BC035044E0CXF8 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.1□□□□□ -0.47
BC035044E0CXF8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.1□□□□□ -0.47
BC035044E0CXF8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Rpph1-201ENSMUST00000175096 319 ntBASIC12.09□□□□□ -0.47
BC035044E0CXF8 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.09□□□□□ -0.47
BC035044E0CXF8 Gm20553-201ENSMUST00000204205 844 ntBASIC12.09□□□□□ -0.47
BC035044E0CXF8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.09□□□□□ -0.47
BC035044E0CXF8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BC035044E0CXF8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms