Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx6-2D3Z4R4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Gm10052-201ENSMUST00000168019 960 ntBASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Mir6404-201ENSMUST00000183699 94 ntBASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Gm7729-201ENSMUST00000050143 801 ntBASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx6-2D3Z4R4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Gm12527-201ENSMUST00000117967 564 ntBASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Gm21814-202ENSMUST00000203277 873 ntBASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Gm44430-201ENSMUST00000203376 995 ntBASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Gm7213-201ENSMUST00000215977 950 ntBASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx6-2D3Z4R4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-2D3Z4R4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-2D3Z4R4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-2D3Z4R4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-2D3Z4R4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-2D3Z4R4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nkx6-2D3Z4R4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nkx6-2D3Z4R4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms