Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Slc22a28B2RT89 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc22a28B2RT89 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc22a28B2RT89 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.18□□□□□ -0.3
Slc22a28B2RT89 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc22a28B2RT89 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.18□□□□□ -0.3
Slc22a28B2RT89 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc22a28B2RT89 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc22a28B2RT89 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Gm27920-201ENSMUST00000183953 96 ntBASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc22a28B2RT89 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Gm12882-201ENSMUST00000121696 517 ntBASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Gm10819-201ENSMUST00000099988 561 ntBASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc22a28B2RT89 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Slc22a28B2RT89 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms