Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm12887B1AVM1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm12887B1AVM1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gm12887B1AVM1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm12887B1AVM1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm12887B1AVM1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Gm12887B1AVM1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Gm23634-201ENSMUST00000175071 91 ntBASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Gm10231-201ENSMUST00000181584 441 ntBASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Gm10175-202ENSMUST00000208752 441 ntBASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.54□□□□□ -0.56
Gm12887B1AVM1 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.54□□□□□ -0.56
Gm12887B1AVM1 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm12887B1AVM1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Gm12887B1AVM1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms