Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.44□□□□□ -0.58
Chd6A3KFM7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.44□□□□□ -0.58
Chd6A3KFM7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gm15131-201ENSMUST00000119124 595 ntBASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.44□□□□□ -0.58
Chd6A3KFM7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.44□□□□□ -0.58
Chd6A3KFM7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.44□□□□□ -0.58
Chd6A3KFM7 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Chd6A3KFM7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm15371-201ENSMUST00000117057 784 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm14726-201ENSMUST00000120623 896 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm25261-201ENSMUST00000157416 134 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm13408-201ENSMUST00000119822 798 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm13935-201ENSMUST00000121859 798 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm13570-201ENSMUST00000140763 309 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm2451-201ENSMUST00000199447 999 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm10290-201ENSMUST00000200451 999 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gm18730-201ENSMUST00000218038 343 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.43□□□□□ -0.58
Chd6A3KFM7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chd6A3KFM7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chd6A3KFM7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms