Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Gm15321-201ENSMUST00000121290 288 ntBASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Gm5479-201ENSMUST00000160578 435 ntBASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cfap99A0A140LIX9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Gm12490-201ENSMUST00000120255 560 ntBASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cfap99A0A140LIX9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Gm12859-201ENSMUST00000117834 427 ntBASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cfap99A0A140LIX9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cfap99A0A140LIX9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms