Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb3S4R1G7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
H2afb3S4R1G7 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
H2afb3S4R1G7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
H2afb3S4R1G7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.89□□□□□ -0.35
H2afb3S4R1G7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Gm16198-201ENSMUST00000118766 670 ntBASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Gm13597-201ENSMUST00000121239 375 ntBASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Gm18733-201ENSMUST00000173950 856 ntBASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afb3S4R1G7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.88□□□□□ -0.35
H2afb3S4R1G7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
H2afb3S4R1G7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms