Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm12490-201ENSMUST00000120255 560 ntBASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm11524-201ENSMUST00000119349 807 ntBASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm13385-201ENSMUST00000121089 220 ntBASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm4804-201ENSMUST00000182234 999 ntBASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn8aQ9WTU3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn8aQ9WTU3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Gm26464-201ENSMUST00000157094 305 ntBASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Gm5354-201ENSMUST00000182417 973 ntBASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Gm45668-201ENSMUST00000211271 493 ntBASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Scn8aQ9WTU3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms