Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trem1Q9JKE2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.82□□□□□ -0.36
Trem1Q9JKE2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.82□□□□□ -0.36
Trem1Q9JKE2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Gm22697-201ENSMUST00000175194 63 ntBASIC12.81□□□□□ -0.36
Trem1Q9JKE2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Gm43799-201ENSMUST00000201845 579 ntBASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trem1Q9JKE2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Gm15039-201ENSMUST00000118914 875 ntBASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.8□□□□□ -0.36
Trem1Q9JKE2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.8□□□□□ -0.36
Trem1Q9JKE2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trem1Q9JKE2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trem1Q9JKE2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms