Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.22□□□□□ -0.13
Tubb3Q9ERD7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Auts2-212ENSMUST00000178555 309 ntBASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Gm18057-201ENSMUST00000208220 503 ntBASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tubb3Q9ERD7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb3Q9ERD7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb3Q9ERD7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb3Q9ERD7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb3Q9ERD7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Tubb3Q9ERD7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Gm44872-201ENSMUST00000207864 420 ntBASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tubb3Q9ERD7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tubb3Q9ERD7 Gm9726-201ENSMUST00000180321 678 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms