Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Barx1Q9ER42 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Barx1Q9ER42 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Barx1Q9ER42 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm5354-201ENSMUST00000182417 973 ntBASIC12.92□□□□□ -0.34
Barx1Q9ER42 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.92□□□□□ -0.34
Barx1Q9ER42 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm27701-201ENSMUST00000184498 110 ntBASIC12.92□□□□□ -0.34
Barx1Q9ER42 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm43630-201ENSMUST00000201550 776 ntBASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.92□□□□□ -0.34
Barx1Q9ER42 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.92□□□□□ -0.34
Barx1Q9ER42 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Barx1Q9ER42 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Gm6007-201ENSMUST00000208170 823 ntBASIC12.91□□□□□ -0.34
Barx1Q9ER42 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Barx1Q9ER42 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Barx1Q9ER42 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.91□□□□□ -0.34
Barx1Q9ER42 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Barx1Q9ER42 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms