Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdc40Q9DC48 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Carlr-201ENSMUST00000181515 2574 ntBASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdc40Q9DC48 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm6415-201ENSMUST00000118488 348 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm17837-201ENSMUST00000186435 985 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm2451-201ENSMUST00000199447 999 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm10290-201ENSMUST00000200451 999 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms