Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm37297-201ENSMUST00000192974 2384 ntBASIC18.79■□□□□ 0.6
U2af1Q9D883 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.79■□□□□ 0.6
U2af1Q9D883 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.79■□□□□ 0.6
U2af1Q9D883 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
U2af1Q9D883 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC18.79■□□□□ 0.6
U2af1Q9D883 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.79■□□□□ 0.6
U2af1Q9D883 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Gm4875-201ENSMUST00000118257 786 ntBASIC18.79■□□□□ 0.6
U2af1Q9D883 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.79■□□□□ 0.6
U2af1Q9D883 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.79■□□□□ 0.6
U2af1Q9D883 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.79■□□□□ 0.6
U2af1Q9D883 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.79■□□□□ 0.6
U2af1Q9D883 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
U2af1Q9D883 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
U2af1Q9D883 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
U2af1Q9D883 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
U2af1Q9D883 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
U2af1Q9D883 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
U2af1Q9D883 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Gm3436-201ENSMUST00000179930 840 ntBASIC18.78■□□□□ 0.6
U2af1Q9D883 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
U2af1Q9D883 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
U2af1Q9D883 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.78■□□□□ 0.6
U2af1Q9D883 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.78■□□□□ 0.6
U2af1Q9D883 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
U2af1Q9D883 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
U2af1Q9D883 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
U2af1Q9D883 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
U2af1Q9D883 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.77■□□□□ 0.6
U2af1Q9D883 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
U2af1Q9D883 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
U2af1Q9D883 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
U2af1Q9D883 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
U2af1Q9D883 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
U2af1Q9D883 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
U2af1Q9D883 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Gm14719-201ENSMUST00000121891 340 ntBASIC18.76■□□□□ 0.59
U2af1Q9D883 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.76■□□□□ 0.59
U2af1Q9D883 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
U2af1Q9D883 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.76■□□□□ 0.59
U2af1Q9D883 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms