Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Gm10154-201ENSMUST00000084445 354 ntBASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chmp5Q9D7S9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp5Q9D7S9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp5Q9D7S9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.89■□□□□ 0.46
Chmp5Q9D7S9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp5Q9D7S9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp5Q9D7S9 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Chmp5Q9D7S9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Gm16198-201ENSMUST00000118766 670 ntBASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.89■□□□□ 0.45
Chmp5Q9D7S9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Gm8584-201ENSMUST00000171982 758 ntBASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Gm15590-201ENSMUST00000078419 552 ntBASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.88■□□□□ 0.45
Chmp5Q9D7S9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Gm27628-201ENSMUST00000184911 107 ntBASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Gm45098-201ENSMUST00000207179 657 ntBASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.87■□□□□ 0.45
Chmp5Q9D7S9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms