Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Gm24543-201ENSMUST00000103867 82 ntBASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem54Q9D7S1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Gm25144-201ENSMUST00000179561 110 ntBASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Gm25352-201ENSMUST00000179815 110 ntBASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Mir6956-201ENSMUST00000183598 62 ntBASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Gm27618-201ENSMUST00000183671 60 ntBASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tmem54Q9D7S1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem54Q9D7S1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Gm16476-201ENSMUST00000221544 139 ntBASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Dupd1-202ENSMUST00000224735 548 ntBASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Mir125a-201ENSMUST00000083545 68 ntBASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem54Q9D7S1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms