Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm27785-201ENSMUST00000184268 110 ntBASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Gm27466-201ENSMUST00000184396 110 ntBASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Gm27703-201ENSMUST00000184836 110 ntBASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smc1aQ9CU62 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Gm10499-201ENSMUST00000174094 934 ntBASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Smc1aQ9CU62 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1aQ9CU62 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1aQ9CU62 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Smc1aQ9CU62 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1aQ9CU62 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1aQ9CU62 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.02■□□□□ 0.15
Smc1aQ9CU62 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1aQ9CU62 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1aQ9CU62 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Matn2-206ENSMUST00000228570 2798 ntBASIC16.01■□□□□ 0.15
Smc1aQ9CU62 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1aQ9CU62 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc1aQ9CU62 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Smc1aQ9CU62 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms