Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ska1Q9CPV1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Gm8749-201ENSMUST00000117737 331 ntBASIC13.52□□□□□ -0.25
Ska1Q9CPV1 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Mir5126-201ENSMUST00000175513 77 ntBASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.52□□□□□ -0.25
Ska1Q9CPV1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ska1Q9CPV1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Gm15590-201ENSMUST00000078419 552 ntBASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ska1Q9CPV1 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Mir5131-201ENSMUST00000175426 93 ntBASIC13.5□□□□□ -0.25
Ska1Q9CPV1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ska1Q9CPV1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms