Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Gm14494-201ENSMUST00000118786 435 ntBASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Acot6-202ENSMUST00000222921 3622 ntBASIC13.88□□□□□ -0.19
Rnf111Q99ML9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Gm8000-201ENSMUST00000188378 592 ntBASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rnf111Q99ML9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Gm9385-201ENSMUST00000117563 472 ntBASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rnf111Q99ML9 Gm17271-201ENSMUST00000165535 355 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms