Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.39□□□□□ -0.27
Nkx6-1Q99MA9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Gm37424-201ENSMUST00000191727 561 ntBASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nkx6-1Q99MA9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Snora78-201ENSMUST00000158630 128 ntBASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Gm21470-201ENSMUST00000187680 696 ntBASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Gm37444-201ENSMUST00000193605 439 ntBASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nkx6-1Q99MA9 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Gm15198-201ENSMUST00000117283 177 ntBASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nkx6-1Q99MA9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms