Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.83□□□□□ -0.03
Cdk5rap3Q99LM2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdk5rap3Q99LM2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdk5rap3Q99LM2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Gm14140-201ENSMUST00000119999 995 ntBASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdk5rap3Q99LM2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Gm15483-201ENSMUST00000120338 456 ntBASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Gm17968-201ENSMUST00000194902 784 ntBASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdk5rap3Q99LM2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.8□□□□□ -0.04
Cdk5rap3Q99LM2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms