Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdha9Q91Y11 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdha9Q91Y11 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha9Q91Y11 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha9Q91Y11 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdha9Q91Y11 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Gm27533-201ENSMUST00000183800 152 ntBASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdha9Q91Y11 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Gm15653-201ENSMUST00000119247 907 ntBASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdha9Q91Y11 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdha9Q91Y11 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms