Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Gm15920-201ENSMUST00000118998 402 ntBASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 AA543401-201ENSMUST00000164248 1269 ntBASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Mir6956-201ENSMUST00000183598 62 ntBASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb22Q91XZ8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Mir1897-201ENSMUST00000122581 272 ntBASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Gm38294-201ENSMUST00000192831 381 ntBASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Gm44872-201ENSMUST00000207864 420 ntBASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb22Q91XZ8 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb22Q91XZ8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhb22Q91XZ8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms