Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usb1Q91W78 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.18□□□□□ -0.14
Usb1Q91W78 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.18□□□□□ -0.14
Usb1Q91W78 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usb1Q91W78 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Usb1Q91W78 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usb1Q91W78 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usb1Q91W78 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usb1Q91W78 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usb1Q91W78 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usb1Q91W78 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.18□□□□□ -0.14
Usb1Q91W78 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Usb1Q91W78 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usb1Q91W78 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Usb1Q91W78 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.17□□□□□ -0.14
Usb1Q91W78 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Usb1Q91W78 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usb1Q91W78 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.17□□□□□ -0.14
Usb1Q91W78 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.17□□□□□ -0.14
Usb1Q91W78 Gm15483-201ENSMUST00000120338 456 ntBASIC14.17□□□□□ -0.14
Usb1Q91W78 Gm13616-201ENSMUST00000120600 222 ntBASIC14.17□□□□□ -0.14
Usb1Q91W78 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Usb1Q91W78 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.17□□□□□ -0.14
Usb1Q91W78 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.17□□□□□ -0.14
Usb1Q91W78 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.17□□□□□ -0.14
Usb1Q91W78 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usb1Q91W78 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.17□□□□□ -0.14
Usb1Q91W78 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Usb1Q91W78 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Usb1Q91W78 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Usb1Q91W78 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.16□□□□□ -0.14
Usb1Q91W78 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.16□□□□□ -0.14
Usb1Q91W78 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usb1Q91W78 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.16□□□□□ -0.14
Usb1Q91W78 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Gm2810-201ENSMUST00000118681 990 ntBASIC14.16□□□□□ -0.14
Usb1Q91W78 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.16□□□□□ -0.14
Usb1Q91W78 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Gm24158-201ENSMUST00000175263 71 ntBASIC14.16□□□□□ -0.14
Usb1Q91W78 Gm10253-201ENSMUST00000194270 940 ntBASIC14.16□□□□□ -0.14
Usb1Q91W78 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.16□□□□□ -0.14
Usb1Q91W78 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.16□□□□□ -0.14
Usb1Q91W78 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Usb1Q91W78 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Usb1Q91W78 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.16□□□□□ -0.14
Usb1Q91W78 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usb1Q91W78 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Usb1Q91W78 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Usb1Q91W78 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usb1Q91W78 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usb1Q91W78 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usb1Q91W78 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usb1Q91W78 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms