Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Gm25144-201ENSMUST00000179561 110 ntBASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Gm25352-201ENSMUST00000179815 110 ntBASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx41Q91VN6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Gm27989-201ENSMUST00000184721 107 ntBASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx41Q91VN6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Gm12428-201ENSMUST00000119844 727 ntBASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.42■□□□□ 0.22
Ddx41Q91VN6 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Gm13823-201ENSMUST00000119930 345 ntBASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Ddx41Q91VN6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms