Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.82□□□□□ -0.04
Trim60Q8VI40 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.82□□□□□ -0.04
Trim60Q8VI40 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim60Q8VI40 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim60Q8VI40 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim60Q8VI40 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Gm10275-202ENSMUST00000168697 495 ntBASIC14.8□□□□□ -0.04
Trim60Q8VI40 Gm2651-201ENSMUST00000203560 838 ntBASIC14.8□□□□□ -0.04
Trim60Q8VI40 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Mzt1-203ENSMUST00000227948 952 ntBASIC14.8□□□□□ -0.04
Trim60Q8VI40 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Gm10275-201ENSMUST00000092620 635 ntBASIC14.8□□□□□ -0.04
Trim60Q8VI40 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.8□□□□□ -0.04
Trim60Q8VI40 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim60Q8VI40 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim60Q8VI40 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.79□□□□□ -0.04
Trim60Q8VI40 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trim60Q8VI40 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim60Q8VI40 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim60Q8VI40 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms